crm_multilayer

Time evolution of maximum, 95th percentile and mean y-coordinate of all cells in colony.

Usage of the crm_multilayer script

class MultilayerConfig(**kwds)

Bases: object

Contain s all parameters and configuration valuese of the crm_multilayer script

static load_from_toml_file(path)

Loads the MultilayerConfig from the file at the given path.

static load_from_toml_str(input)

Loads the MultilayerConfig from the given string.

approx_eq(other)

clone_with_args(**kwds)

Clones the current MultilayerConfig with new optional keyword arguments

Parameters:

• self (MultilayerConfig) – Reference to the object itself.

• kwds (dict) – Keyword arguments for the new MultilayerConfig.

to_toml_file(filename)

Saves the MultilayerConfig to the given file. This function will fail if the file already exists.

to_toml_string()

Converts the MultilayerConfig into a toml string.

agent_settings

Contains settings for the Agents of the simulation. See AgentSettings

config

Contains base configuration. See Configuration

dx

Padding of the domain for the position generation algorithm

n_vertices

Number of vertices to use per agent

randomize_positions

Controls how much positions are randomized in the beginning of the simulation

rng_seed

Random seed for position generation

crm_multilayer_main()