crm_divide

Usage of the crm_divide script

crm_divide -h

usage: crm_divide [-h] [-i ITERATION] [--output-dir OUTPUT_DIR] [--skip-profiles] [--skip-time-evolution]
                [--skip-snapshots] [--skip-timings] [--skip-mask-adjustment] [--only-mask-adjustment]
                [-w WORKERS]

Fits the Bacterial Rods model to a system of cells.

options:
-h, --help            show this help message and exit
-i, --iteration ITERATION
                        Use existing output folder instead of creating new one
--output-dir OUTPUT_DIR
                        Directory where to store results
--skip-profiles       Skip plotting of profiles
--skip-time-evolution
                        Skip plotting of the time evolution of costs
--skip-snapshots      Skip plotting of snapshots and masks
--skip-timings        Skip plotting of the timings
--skip-mask-adjustment
                        Skip plotting of the adjusted masks
--only-mask-adjustment
                        Only plot adjusted masks
-w, --workers WORKERS
                        Number of threads to utilize